Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gntRGluconate utilization operon repressor. (331 aa)    
Predicted Functional Partners:
purR_3
LacI-family transcriptional regulator.
  
     0.753
fadR
Fatty acid-fatty acyl responsive DNA-binding protein.
    
 
 0.691
gntK
Putative gluconokinase.
 
 
 0.614
gltB
Glutamate synthase [NADPH] large chain precursor.
    
 
 0.568
deoR
Deoxyribose operon repressor.
      
 0.562
fryA
Putative phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
   
 
 0.537
gntU
Low-affinity gluconate transporter.
     
 0.507
ycaC_2
Putative Isochorismatase family protein.
      
 0.496
yhhW_1
Conserved hypothetical protein; Belongs to the pirin family.
       0.486
yhhX
Putative oxidoreductase.
 
     0.412
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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