STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntRGluconate utilization operon repressor. (331 aa)    
Predicted Functional Partners:
purR_3
LacI-family transcriptional regulator.
  
     0.753
fadR
Fatty acid-fatty acyl responsive DNA-binding protein.
    
 
 0.644
gntK
Putative gluconokinase.
 
 
 0.638
deoR
Deoxyribose operon repressor.
      
 0.630
fryA
Putative phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
   
 
 0.603
gltB
Glutamate synthase [NADPH] large chain precursor.
    
 
 0.579
ycaC_2
Putative Isochorismatase family protein.
      
 0.512
gntU
Low-affinity gluconate transporter.
       0.509
yhhW_1
Conserved hypothetical protein; Belongs to the pirin family.
       0.477
yhhX
Putative oxidoreductase.
 
     0.411
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.