Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phpPuative phophotriesterase. (344 aa)    
Predicted Functional Partners:
SBG_3140
Hypothetical protein.
 
    0.911
SBG_3141
Putative membrane protein.
 
    0.884
SBG_1220
Putative pathogenicity island protein.
 
    0.779
rbsK_2
Putative ribokinase.
 
    0.707
frlB_5
Putative phosphosugar isomerase.
  
    0.489
parE
Topoisomerase IV subunit B.
      
 0.479
cutC
Putative copper homeostasis protein; Participates in the control of copper homeostasis.
  
     0.477
SBG_3143
Conserved hypothetical protein.
       0.461
lpfE
Fimbrial protein.
  
     0.430
bigA
Putative surface-exposed virulence protein.
  
     0.429
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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