STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_3168Putative membrane protein. (208 aa)    
Predicted Functional Partners:
sulA
Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.754
yibL
Conserved hypothetical protein.
  
     0.749
SBG_2083
Conserved hypothetical protein; Sequence similarity extends further upstream for these two CDS but the only suitable translational start site for S. bongori would incorporate a stop codon into the sequence. Consequently it is possible that this CDS is a pseudogene.
  
     0.732
yhjS
Conserved hypothetical protein.
  
     0.728
yecF
Conserved hypothetical protein.
  
     0.707
SBG_0411
Conserved hypothetical lipoprotein.
  
     0.689
ompX
Outer membrane protein X precursor.
  
     0.668
SBG_2980
Conserved hypothetical protein.
  
     0.658
mtlR
Mannitol operon repressor (mannitol repressor protein).
  
     0.644
cdh
CDP-diglyceride hydrolase.
  
     0.643
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.