STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcp_2Methyl-accepting chemotaxis citrate transducer. (547 aa)    
Predicted Functional Partners:
cheV
Putative receptor/regulator protein.
 
 0.998
cheW
Purine binding chemotaxis protein.
 
 0.991
cheA
Chemotaxis protein CheA.
 
 0.991
cheR
Chemotaxis protein methyltransferase.
 
 0.987
cheB
Protein-glutamate methylesterase.
 
 0.985
cheY
Chemotaxis protein CheY.
 
 0.960
yhjH
Conserved hypothetical protein.
   
   0.853
aer
Aerotaxis receptor protein.
 
 
0.669
motA
Motility protein A.
 
  
 0.608
arcB
Aerobic respiration control sensor protein.
 
 
 0.606
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.