STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frlB_2Putative phosphosugar-binding protein. (325 aa)    
Predicted Functional Partners:
frlD
Fructoselysine kinase.
 
 
 0.958
glmS_1
Putative isomerase; Similarity to the C-terminus of many known isomerases.
 
  
 0.753
glmS_2
Putative phosphosugar isomerase.
 
  
 0.714
pspF_3
Putative transcriptional regulatory protein.
 
    0.687
luxO
Sigma-54 dependent transcriptional regulatory protein.
 
    0.652
manX_1
PTS-family sugar transport protein component IIB.
 
  
 0.647
agaC_2
PTS system, IIc component.
 
  
 0.575
yvoA
gntR family regulatory protein.
 
  
 0.556
manX_3
PTS system, IIa component.
 
  
 0.553
ptsL
PTS system, mannose-specific IIAB component.
  
  
 0.517
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.