Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lpfA | lpfB | SBG_3233 | SBG_3232 | Long polar fimbria protein A. | Fimbrial chaperone protein. | 0.939 |
lpfA | lpfC | SBG_3233 | SBG_3231 | Long polar fimbria protein A. | Outer membrane fimbrial usher protein. | 0.933 |
lpfA | lpfD | SBG_3233 | SBG_3230 | Long polar fimbria protein A. | Fimbrial protein. | 0.610 |
lpfA | lpfE | SBG_3233 | SBG_3229 | Long polar fimbria protein A. | Fimbrial protein. | 0.623 |
lpfB | lpfA | SBG_3232 | SBG_3233 | Fimbrial chaperone protein. | Long polar fimbria protein A. | 0.939 |
lpfB | lpfC | SBG_3232 | SBG_3231 | Fimbrial chaperone protein. | Outer membrane fimbrial usher protein. | 0.964 |
lpfB | lpfD | SBG_3232 | SBG_3230 | Fimbrial chaperone protein. | Fimbrial protein. | 0.957 |
lpfB | lpfE | SBG_3232 | SBG_3229 | Fimbrial chaperone protein. | Fimbrial protein. | 0.984 |
lpfC | lpfA | SBG_3231 | SBG_3233 | Outer membrane fimbrial usher protein. | Long polar fimbria protein A. | 0.933 |
lpfC | lpfB | SBG_3231 | SBG_3232 | Outer membrane fimbrial usher protein. | Fimbrial chaperone protein. | 0.964 |
lpfC | lpfD | SBG_3231 | SBG_3230 | Outer membrane fimbrial usher protein. | Fimbrial protein. | 0.820 |
lpfC | lpfE | SBG_3231 | SBG_3229 | Outer membrane fimbrial usher protein. | Fimbrial protein. | 0.939 |
lpfC | yhjW | SBG_3231 | SBG_3228 | Outer membrane fimbrial usher protein. | Putative membrane protein. | 0.419 |
lpfD | lpfA | SBG_3230 | SBG_3233 | Fimbrial protein. | Long polar fimbria protein A. | 0.610 |
lpfD | lpfB | SBG_3230 | SBG_3232 | Fimbrial protein. | Fimbrial chaperone protein. | 0.957 |
lpfD | lpfC | SBG_3230 | SBG_3231 | Fimbrial protein. | Outer membrane fimbrial usher protein. | 0.820 |
lpfD | lpfE | SBG_3230 | SBG_3229 | Fimbrial protein. | Fimbrial protein. | 0.961 |
lpfD | yacH | SBG_3230 | SBG_0152 | Fimbrial protein. | Putative exported protein. | 0.424 |
lpfD | yhjW | SBG_3230 | SBG_3228 | Fimbrial protein. | Putative membrane protein. | 0.436 |
lpfE | lpfA | SBG_3229 | SBG_3233 | Fimbrial protein. | Long polar fimbria protein A. | 0.623 |
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