STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uhpCRegulatory protein. (442 aa)    
Predicted Functional Partners:
uhpB
Two-component system sensor histidine kinase.
 
 
 0.999
uhpA
Two-component system response regulator protein.
 
  
 0.970
uhpC_5
Putative transport protein.
  
  
 
0.908
exuT_2
Hexuronate transporter; Also exuT.
  
   
 0.742
uhpT
Hexosephosphate transport protein.
 
   
0.610
fepD
Ferric enterobactin transport protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.564
ilvN
Acetohydroxy acid synthase I, small subunit.
       0.442
ilvB
Acetohydroxy acid synthase I, small subunit.
       0.442
glpX
Putative glycerol metabolic protein.
   
  
 0.404
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.