STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uhpBTwo-component system sensor histidine kinase. (500 aa)    
Predicted Functional Partners:
uhpC
Regulatory protein.
 
 
 0.999
uhpA
Two-component system response regulator protein.
 
 0.999
uhpT
Hexosephosphate transport protein.
 
  
 0.968
uhpC_5
Putative transport protein.
 
 
 0.922
narP
Nitrate/nitrite response regulator protein NarP.
 
 
 0.763
narL
Nitrate/nitrite response regulator protein NarL.
 
 
 0.652
yhjB
Hypothetical luxR-family transcriptional regulator.
 
   0.649
sirA
Invasion response-regulator.
 
 
 0.634
rcsB
Regulator of capsule synthesis B component.
 
 
 0.612
csgD
Putative regulatory protein.
 
 
   0.597
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.