STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbEThiol:disulfide interchange protein; That this CDS is identical to SBG2046. (185 aa)    
Predicted Functional Partners:
ccmF
Cytochrome c-type biogenesis protein F; That this CDS is identical to SBG20472.
 
  
 0.977
ccmH
Cytochrome c-type biogenesis protein CcmH precursor; Possible subunit of a heme lyase.
 
  
 0.969
ccmE
Cytochrome c-type biogenesis protein; That this CDS is identical to SBG2048.
 
  
 0.961
ccmC
Heme exporter protein c; That this CDS is identical to SBG2049.
 
  
 0.913
ccmF2
Cytochrome c-type biogenesis protein F2; That this CDS is identical to SBG3376.
 
  
 0.905
ccmH2
Cytochrome c-type biogenesis protein H2; That this CDS is almost identical to SBG3374 99% identity in 340 aa overlap.
 
  
 0.872
ccmB
Heme exporter protein B.
 
  
 0.857
ccmC2
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.851
ccmE2
Cytochrome C-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.838
ccmA
Cheme exporter protein A; That this CDS is identical to SBG2051.
 
   
 0.817
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.