STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmBHeme exporter protein B. (219 aa)    
Predicted Functional Partners:
ccmA
Cheme exporter protein A; That this CDS is identical to SBG2051.
 
 0.993
ccmC
Heme exporter protein c; That this CDS is identical to SBG2049.
 
 
 0.984
ccmA2
Heme exporter protein A2; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 
 0.971
ccmC2
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
 
 0.965
ccmE
Cytochrome c-type biogenesis protein; That this CDS is identical to SBG2048.
 
 
 0.935
ccmE2
Cytochrome C-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
 
 0.906
ccmF
Cytochrome c-type biogenesis protein F; That this CDS is identical to SBG20472.
 
  
 0.904
ccmH
Cytochrome c-type biogenesis protein CcmH precursor; Possible subunit of a heme lyase.
 
   
 0.890
dsbE
Thiol:disulfide interchange protein; That this CDS is identical to SBG2046.
 
  
 0.857
yhjA
Putative cytochrome c peroxidase.
 
     0.829
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.