STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOV39431_2Conserved hypothetical protein. (194 aa)    
Predicted Functional Partners:
yieE
Conserved hypothetical protein.
  
  
 0.969
fhuE
FhuE receptor precursor.
 
      0.645
SBG_2908
Putative monooxygenase.
  
 
 0.537
mdaB
Putative oxidoreductase; Similar to many proposed modulator of drug activity proteins e.g. Escherichia coli MdaB.
     
 0.488
yidZ
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.478
yebC
Conserved hypothetical protein.
      
 0.476
dsbA
Putative arylsulfate sulfotransferase (pseudogene); 1 probable transmembrane helix predicted for SBG2784 by TMHMM2.0 at aa 9-31.
  
    0.447
yhbO
Conserved hypothetical protein.
     
 0.434
yidY
Putative membrane transport protein.
       0.433
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.