Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SBOV39431_2Conserved hypothetical protein. (194 aa)    
Predicted Functional Partners:
yieE
Conserved hypothetical protein.
  
  
 0.924
fhuE
FhuE receptor precursor.
 
      0.645
yidZ
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.478
SBG_2908
Putative monooxygenase.
  
 
 0.468
dsbA
Putative arylsulfate sulfotransferase (pseudogene); 1 probable transmembrane helix predicted for SBG2784 by TMHMM2.0 at aa 9-31.
  
    0.455
yidY
Putative membrane transport protein.
       0.433
yhhW_2
Putative pirin-related protein; Belongs to the pirin family.
 
  
 0.414
yfcG
Putative glutathione-S transferase.
  
    0.413
yghU
Putative transferase.
  
    0.413
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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