Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
pstS | sbdB | SBG_3409 | SBG_3412 | Periplasmic phosphate-binding protein. | Fimbrial chaperone protein. | 0.418 |
pstS | sbdC | SBG_3409 | SBG_3411 | Periplasmic phosphate-binding protein. | Fimbrial membrane usher protein. | 0.448 |
pstS | sbdD | SBG_3409 | SBG_3410 | Periplasmic phosphate-binding protein. | Putative fimbrial protein. | 0.461 |
sbdA | sbdB | SBG_3413 | SBG_3412 | Putative fimbrial subunit protein. | Fimbrial chaperone protein. | 0.919 |
sbdA | sbdC | SBG_3413 | SBG_3411 | Putative fimbrial subunit protein. | Fimbrial membrane usher protein. | 0.911 |
sbdA | sbdD | SBG_3413 | SBG_3410 | Putative fimbrial subunit protein. | Putative fimbrial protein. | 0.488 |
sbdB | pstS | SBG_3412 | SBG_3409 | Fimbrial chaperone protein. | Periplasmic phosphate-binding protein. | 0.418 |
sbdB | sbdA | SBG_3412 | SBG_3413 | Fimbrial chaperone protein. | Putative fimbrial subunit protein. | 0.919 |
sbdB | sbdC | SBG_3412 | SBG_3411 | Fimbrial chaperone protein. | Fimbrial membrane usher protein. | 0.959 |
sbdB | sbdD | SBG_3412 | SBG_3410 | Fimbrial chaperone protein. | Putative fimbrial protein. | 0.759 |
sbdC | pstS | SBG_3411 | SBG_3409 | Fimbrial membrane usher protein. | Periplasmic phosphate-binding protein. | 0.448 |
sbdC | sbdA | SBG_3411 | SBG_3413 | Fimbrial membrane usher protein. | Putative fimbrial subunit protein. | 0.911 |
sbdC | sbdB | SBG_3411 | SBG_3412 | Fimbrial membrane usher protein. | Fimbrial chaperone protein. | 0.959 |
sbdC | sbdD | SBG_3411 | SBG_3410 | Fimbrial membrane usher protein. | Putative fimbrial protein. | 0.802 |
sbdD | pstS | SBG_3410 | SBG_3409 | Putative fimbrial protein. | Periplasmic phosphate-binding protein. | 0.461 |
sbdD | sbdA | SBG_3410 | SBG_3413 | Putative fimbrial protein. | Putative fimbrial subunit protein. | 0.488 |
sbdD | sbdB | SBG_3410 | SBG_3412 | Putative fimbrial protein. | Fimbrial chaperone protein. | 0.759 |
sbdD | sbdC | SBG_3410 | SBG_3411 | Putative fimbrial protein. | Fimbrial membrane usher protein. | 0.802 |