Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
agp | glk | SBG_0961 | SBG_2211 | Glucose-1-phosphatase precursor (G1Pase),secreted. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.900 |
agp | yihR | SBG_0961 | SBG_3537 | Glucose-1-phosphatase precursor (G1Pase),secreted. | Conserved hypothetical protein. | 0.903 |
agp | yihX | SBG_0961 | SBG_3543 | Glucose-1-phosphatase precursor (G1Pase),secreted. | Putative haloacid dehalogenase-like hydrolase. | 0.900 |
galK | lacZ | SBG_0657 | SBG_0324 | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | Beta-galactosidase. | 0.742 |
galK | yihR | SBG_0657 | SBG_3537 | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | Conserved hypothetical protein. | 0.958 |
glk | agp | SBG_2211 | SBG_0961 | Glucokinase; Belongs to the bacterial glucokinase family. | Glucose-1-phosphatase precursor (G1Pase),secreted. | 0.900 |
glk | lacZ | SBG_2211 | SBG_0324 | Glucokinase; Belongs to the bacterial glucokinase family. | Beta-galactosidase. | 0.907 |
glk | yihR | SBG_2211 | SBG_3537 | Glucokinase; Belongs to the bacterial glucokinase family. | Conserved hypothetical protein. | 0.906 |
glk | yihX | SBG_2211 | SBG_3543 | Glucokinase; Belongs to the bacterial glucokinase family. | Putative haloacid dehalogenase-like hydrolase. | 0.900 |
lacZ | galK | SBG_0324 | SBG_0657 | Beta-galactosidase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.742 |
lacZ | glk | SBG_0324 | SBG_2211 | Beta-galactosidase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.907 |
lacZ | yihQ | SBG_0324 | SBG_3536 | Beta-galactosidase. | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.441 |
lacZ | yihR | SBG_0324 | SBG_3537 | Beta-galactosidase. | Conserved hypothetical protein. | 0.916 |
yihP | yihQ | SBG_3535 | SBG_3536 | Putative membrane permease. | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | 0.963 |
yihP | yihR | SBG_3535 | SBG_3537 | Putative membrane permease. | Conserved hypothetical protein. | 0.929 |
yihP | yihS | SBG_3535 | SBG_3538 | Putative membrane permease. | Conserved hypothetical protein; Catalyzes the isomerization of sulfoquinovose (SQ) to 6- deoxy-6-sulfo-D-fructose (SF). | 0.836 |
yihP | yihT | SBG_3535 | SBG_3539 | Putative membrane permease. | Putative aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family. | 0.803 |
yihP | yihU | SBG_3535 | SBG_3540 | Putative membrane permease. | Putative oxidoreductase; Reduces 3-sulfolactaldehyde (SLA) to 2,3-dihydroxypropane 1- sulfonate (DHPS); Belongs to the HIBADH-related family. 3-sulfolactaldehyde reductase subfamily. | 0.794 |
yihQ | lacZ | SBG_3536 | SBG_0324 | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | Beta-galactosidase. | 0.441 |
yihQ | yihP | SBG_3536 | SBG_3535 | Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family. | Putative membrane permease. | 0.963 |
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