Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_3167 | rhaT | SBG_3167 | SBG_3563 | Putative membrane protein. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.552 |
| SBG_3167 | yhfC | SBG_3167 | SBG_3080 | Putative membrane protein. | Putative membrane protein. | 0.710 |
| exuT_3 | rhaT | SBG_0725 | SBG_3563 | Putative sugar transporter. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.450 |
| modF | rhaT | SBG_0660 | SBG_3563 | Putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA). | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.486 |
| pepE | rhaT | SBG_3659 | SBG_3563 | Peptidase E; Belongs to the peptidase S51 family. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.531 |
| rhaA | rhaB | SBG_3559 | SBG_3560 | L-rhamnose isomerase. | Rhamnulokinase. | 0.999 |
| rhaA | rhaD | SBG_3559 | SBG_3558 | L-rhamnose isomerase. | Rhamnulose-1-phosphate aldolase. | 0.988 |
| rhaA | rhaR | SBG_3559 | SBG_3562 | L-rhamnose isomerase. | L-rhamnose operon transcriptional activator. | 0.663 |
| rhaA | rhaT | SBG_3559 | SBG_3563 | L-rhamnose isomerase. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.902 |
| rhaA | yiiL | SBG_3559 | SBG_3556 | L-rhamnose isomerase. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.997 |
| rhaB | rhaA | SBG_3560 | SBG_3559 | Rhamnulokinase. | L-rhamnose isomerase. | 0.999 |
| rhaB | rhaD | SBG_3560 | SBG_3558 | Rhamnulokinase. | Rhamnulose-1-phosphate aldolase. | 0.999 |
| rhaB | rhaR | SBG_3560 | SBG_3562 | Rhamnulokinase. | L-rhamnose operon transcriptional activator. | 0.853 |
| rhaB | rhaT | SBG_3560 | SBG_3563 | Rhamnulokinase. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.917 |
| rhaB | yiiL | SBG_3560 | SBG_3556 | Rhamnulokinase. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.966 |
| rhaD | rhaA | SBG_3558 | SBG_3559 | Rhamnulose-1-phosphate aldolase. | L-rhamnose isomerase. | 0.988 |
| rhaD | rhaB | SBG_3558 | SBG_3560 | Rhamnulose-1-phosphate aldolase. | Rhamnulokinase. | 0.999 |
| rhaD | rhaR | SBG_3558 | SBG_3562 | Rhamnulose-1-phosphate aldolase. | L-rhamnose operon transcriptional activator. | 0.648 |
| rhaD | rhaT | SBG_3558 | SBG_3563 | Rhamnulose-1-phosphate aldolase. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.876 |
| rhaD | yiiL | SBG_3558 | SBG_3556 | Rhamnulose-1-phosphate aldolase. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.988 |
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