STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxATwo-component sensor kinase protein. (457 aa)    
Predicted Functional Partners:
cpxR
Two-component response regulatory protein.
 
 0.999
cpxP
Extracytoplasmic stress protein for protein-mediated toxicities.
 
   
 0.970
arcB
Aerobic respiration control sensor protein.
 
 
0.948
ompR
Two-component response regulator OmpR.
 
 
 0.944
cutF
Copper homeostasis protein CutF precursor (lipoprotein nlpE).
     
 0.914
baeR
Putative two-component system response regulator.
 
 
 0.878
phoP
Transcriptional regulatory protein PhoP,regulator of virulence determinants.
 
 0.871
rstA
Putative two-component response regulator.
 
 
 0.822
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.787
copR
Response regulator.
 
 0.784
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.