STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_3753Putative exported protein. (466 aa)    
Predicted Functional Partners:
appY_2
araC family regulatory protein.
  
   
 0.899
bcfE
Fimbrial subunit.
  
     0.769
chiA_2
Putative chitinase.
  
     0.760
bcfA
Type-1 fimbrial major subunit.
  
     0.758
SBG_0015
Putative regulatory protein.
  
     0.755
SBG_0224
Putative secreted chitinase.
  
     0.742
nucA
Putative nuclease.
  
     0.736
cadC
Transcriptional activator cadC.
  
     0.730
bcfF
Fimbrial subunit.
  
     0.726
lpfE
Fimbrial protein.
  
     0.712
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.