Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gutQ | sgaH | SBG_2458 | SBG_3829 | Putative phosphosugar binding protein. | Putative hexulose-6-phosphate synthase. | 0.752 |
gutQ | yjfR | SBG_2458 | SBG_3825 | Putative phosphosugar binding protein. | Conserved hypothetical protein. | 0.480 |
sgaA | sgaB | SBG_3828 | SBG_3827 | Putative sugar phosphotransferase. | Putative PTS system IIB protein. | 0.997 |
sgaA | sgaE | SBG_3828 | SBG_3831 | Putative sugar phosphotransferase. | Putative class II aldolase. | 0.956 |
sgaA | sgaH | SBG_3828 | SBG_3829 | Putative sugar phosphotransferase. | Putative hexulose-6-phosphate synthase. | 0.979 |
sgaA | sgaT | SBG_3828 | SBG_3826 | Putative sugar phosphotransferase. | Putative transport protein SgaT. | 0.997 |
sgaA | sgaU | SBG_3828 | SBG_3830 | Putative sugar phosphotransferase. | Conserved hypothetical protein. | 0.983 |
sgaA | ulaA_3 | SBG_3828 | SBG_0779 | Putative sugar phosphotransferase. | Putative PTS transport protein, component II. | 0.959 |
sgaA | yjfR | SBG_3828 | SBG_3825 | Putative sugar phosphotransferase. | Conserved hypothetical protein. | 0.994 |
sgaB | sgaA | SBG_3827 | SBG_3828 | Putative PTS system IIB protein. | Putative sugar phosphotransferase. | 0.997 |
sgaB | sgaE | SBG_3827 | SBG_3831 | Putative PTS system IIB protein. | Putative class II aldolase. | 0.850 |
sgaB | sgaH | SBG_3827 | SBG_3829 | Putative PTS system IIB protein. | Putative hexulose-6-phosphate synthase. | 0.972 |
sgaB | sgaT | SBG_3827 | SBG_3826 | Putative PTS system IIB protein. | Putative transport protein SgaT. | 0.999 |
sgaB | sgaU | SBG_3827 | SBG_3830 | Putative PTS system IIB protein. | Conserved hypothetical protein. | 0.957 |
sgaB | ulaA_3 | SBG_3827 | SBG_0779 | Putative PTS system IIB protein. | Putative PTS transport protein, component II. | 0.979 |
sgaB | yjfQ | SBG_3827 | SBG_3824 | Putative PTS system IIB protein. | Putative transcriptional regulator. | 0.695 |
sgaB | yjfR | SBG_3827 | SBG_3825 | Putative PTS system IIB protein. | Conserved hypothetical protein. | 0.986 |
sgaE | sgaA | SBG_3831 | SBG_3828 | Putative class II aldolase. | Putative sugar phosphotransferase. | 0.956 |
sgaE | sgaB | SBG_3831 | SBG_3827 | Putative class II aldolase. | Putative PTS system IIB protein. | 0.850 |
sgaE | sgaH | SBG_3831 | SBG_3829 | Putative class II aldolase. | Putative hexulose-6-phosphate synthase. | 0.970 |
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