STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfJPutative exported protein. (185 aa)    
Predicted Functional Partners:
ytfK
Conserved hypothetical protein.
 
    0.829
ycfP
Conserved hypothetical protein; Belongs to the UPF0227 family.
  
     0.608
tus
DNA replication terminus site-binding protein; DNA sequence-specific contrahelicase.
  
     0.595
yjbO
Putative membrane protein.
  
     0.594
SBG_1710
Putative exported protein.
  
     0.587
alaE
Putative membrane protein; Exports L-alanine; Belongs to the AlaE exporter family.
  
     0.575
uspB
Universal stress protein B.
  
     0.571
SBOV24451_1
Conserved hypothetical protein.
  
     0.570
mtlR
Mannitol operon repressor (mannitol repressor protein).
  
     0.570
STY1080_1
Conserved hypothetical protein.
  
     0.563
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.