STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manX_3PTS system, IIa component. (140 aa)    
Predicted Functional Partners:
sorB
PTS system, IIb component.
 
 
 0.996
agaC_2
PTS system, IIc component.
 
 0.996
manZ_6
PTS system IId component.
 
 0.992
manZ_5
PTS-family sugar transport protein component IID.
 
 0.977
manY_2
PTS-family sugar transport protein component IIC.
 
 0.977
pspF_3
Putative transcriptional regulatory protein.
 
  
 0.976
manX_2
PTS-family sugar transport protein component IIB.
 
 
 0.973
luxO
Sigma-54 dependent transcriptional regulatory protein.
 
  
 0.952
SBG_3344
Putative PTS system protein.
  
   
 0.931
ptsH
Phosphocarrier protein HPr.
   
 0.922
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.