STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjBPutative membrane protein. (157 aa)    
Predicted Functional Partners:
yjjP
Putative membrane protein.
  
 0.995
yejF
Putative ABC-transporter ATP-binding protein.
      
 0.831
dcuC
C4-dicarboxylate anaerobic carrier.
  
     0.669
yqfB
Conserved hypothetical protein; Belongs to the UPF0267 family.
  
     0.638
ycdZ
Putative membrane protein.
  
     0.568
menC
O-succinylbenzoate-CoA synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.431
yciN
Conserved hypothetical protein.
  
     0.424
frdC
Fumarate reductase complex subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
  
     0.420
ycfP
Conserved hypothetical protein; Belongs to the UPF0227 family.
  
     0.413
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.