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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0019Putative amidase. (425 aa)    
Predicted Functional Partners:
ftsX
Putative cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.831
fruA
Putative fructan beta-fructosidase precursor.
  
  
 0.684
SUB0232
Conserved hypothetical protein.
  
     0.675
ftsE
Putative cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.662
SUB0888
Conserved hypothetical protein (fragment); PS00014 Endoplasmic reticulum targeting sequence.
  
  
 0.658
SUB0010
Putative septum formation initiator protein.
  
   
 0.638
prsA1
Ribose-phosphate pyrophosphokinase 1; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
     
 0.636
SUB0017
Rod shape-determining protein MreC.
     
 0.633
SUB0018
Putative membrane protein.
       0.613
SUB1008
Putative 30S ribosomal protein S1.
  
  
 0.567
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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