Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB0042Putative beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family. (594 aa)    
Predicted Functional Partners:
SUB0044
Sugar phosphotransferase system (PTS), sorbose-specific family, IIC component.
 
   
 0.839
SUB0043
Sugar phosphotransferase system (PTS), sorbose subfamily, IIB component.
     
 0.836
agaS
Putative tagatose-6-phosphate aldose/ketose isomerase.
 
   
 0.828
SUB0045
Sugar phosphotransferase system (PTS), mannose/fructose/sorbose family, IID component.
 
   
 0.827
SUB0046
Sugar phosphotransferase system (PTS), fructose family, IIA component.
     
 0.795
SUB0041
GntR family regulatory protein.
     
 0.774
lacC2
Tagatose-6-phosphate kinase 2; Similar to SUB1455, 61.736% identity (61.935% ungapped) in 311 aa overlap (1-310:1-311); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
     
 0.566
uidA
Putative beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.499
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
   0.439
SUB1651
Acetyl xylan esterase (AXE1) family protein.
 
    0.411
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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