STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0046Sugar phosphotransferase system (PTS), fructose family, IIA component. (135 aa)    
Predicted Functional Partners:
SUB0044
Sugar phosphotransferase system (PTS), sorbose-specific family, IIC component.
 
 0.997
SUB0045
Sugar phosphotransferase system (PTS), mannose/fructose/sorbose family, IID component.
 
 0.997
SUB0043
Sugar phosphotransferase system (PTS), sorbose subfamily, IIB component.
 
 
 0.996
manN
Putative mannose-specific phosphotransferase system (PTS), IIC component (pseudogene); HMMPfam hit to PF03609, PTS system sorbose-specific iic component, score 1.4e-132.
 
 0.989
SUB0187
Sugar phosphotransferase system (PTS), mannose/fructose family, IIC component.
 
 0.970
ptsH
Histidine-containing phosphocarrier protein (HPr).
 
 0.955
manL
Putative mannose-specific phosphotransferase system (PTS), IIAB component.
 
 
0.955
pmi
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.912
manZ
Sugar phosphotransferase system (PTS), mannose/fructose/sorbose family, IID component.
 
 
 0.838
scrK2
Similar to SUB1542, 69.310% identity (69.310% ungapped) in 290 aa overlap (1-290:4-293).
    
 0.810
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.