STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comYCPutative competence protein. (107 aa)    
Predicted Functional Partners:
SUB0119
Putative competence protein.
 
  
 0.964
SUB0122
Putative exported protein.
  
  
 0.952
SUB0118
Putative competence protein.
  
  
 0.938
SUB0123
Putative membrane protein.
  
  
 0.937
SUB0125
Conserved hypothetical protein.
 
     0.826
SUB0121
Putative competence protein.
       0.800
SUB0124
Putative exported protein.
       0.800
comFA
Putative late competence protein.
 
  
 0.784
SUB0117
Conserved hypothetical protein.
 
     0.727
SUB0399
Putative exported protein.
  
     0.710
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.