Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB0129CAAX amino terminal protease family membrane protein. (217 aa)    
Predicted Functional Partners:
SUB0128
Putative membrane protein.
       0.813
SUB0127
Putative DNA-binding protein.
       0.798
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.568
SUB0125
Conserved hypothetical protein.
 
     0.558
SUB1663
ABC-2 type transporter membrane protein.
  
  
 0.451
SUB0119
Putative competence protein.
     
 0.434
SUB0527
Nitroreductase family protein.
  
  
 0.404
SUB1055
Nitroreductase family protein.
  
  
 0.404
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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