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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lbpLactoferrin binding protein; Similar to Streptococcus uberis Lbp lactoferrin binding protein UniProt:Q6U7J0 (561 aa) fasta scores: E()=1.9e-52, 62.234% id in 564 aa. (515 aa)    
Predicted Functional Partners:
sclB
Collagen-like surface-anchored protein.
  
   
 0.796
SUB0144
Putative Mga-like regulatory protein.
     
 0.666
SUB1635
Putative membrane anchored protein.
  
   
 0.507
SUB0061
Putative membrane protein.
  
     0.491
scpA-2
C5A peptidase precursor.
      
 0.455
SUB1152
Putative glutamine ABC transporter, glutamine-binding protein/permease protein.
      
 0.450
SUB0826
Putative surface-anchored subtilase family protein.
      
 0.445
SUB0888
Conserved hypothetical protein (fragment); PS00014 Endoplasmic reticulum targeting sequence.
      
 0.445
hasA
Hyaluronan synthase.
      
 0.444
hasB1
UDP-glucose 6-dehydrogenase 1; Similar to SUB1027, 58.293% identity (59.900% ungapped) in 410 aa overlap (2-401:3-411).
      
 0.424
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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