STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0149Hypothetical protein; Doubtful CDS. (43 aa)    
Predicted Functional Partners:
SUB0148
Prophage maintenance system killer protein (fragment); Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.678
SUB0150
Conserved hypothetical protein.
       0.678
SUB0151
Putative membrane protein.
       0.678
SUB1158
Putative membrane protein.
      
 0.495
SUB1413
Putative membrane protein.
      
 0.495
SUB1468
Conserved hypothetical protein.
      
 0.495
SUB1619
Conserved hypothetical protein; Belongs to the UPF0356 family.
      
 0.495
SUB1832A
Putative phage membrane protein; Similar to SUB0223, 82.540% identity (82.540% ungapped) in 63 aa overlap (1-63:1-63).
      
 0.495
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.