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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0184Extracellular sugar-binding protein. (434 aa)    
Predicted Functional Partners:
SUB0182
Sensor histidine kinase.
 
    0.956
SUB0181
Putative extracellular sugar-binding protein.
 
  
 0.955
SUB0183
Response regulator protein.
 
    0.951
SUB0185
Sugar phosphotransferase system (PTS), fructose-specific family, IIA component.
 
  
 0.885
SUB0187
Sugar phosphotransferase system (PTS), mannose/fructose family, IIC component.
 
   
 0.872
SUB0186
Sugar phosphotransferase system (PTS), sorbose subfamily, IIB component.
 
   
 0.871
manZ
Sugar phosphotransferase system (PTS), mannose/fructose/sorbose family, IID component.
 
    0.855
SUB0189
Putative membrane protein.
 
    0.853
SUB1656
Putative transport system permease.
 
 
 0.747
SUB0305
Binding-protein-dependent transport system membrane protein; Possible alternative translational start site.
  
 
 0.713
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.