Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB0194Transcriptional regulator (antiterminator). (617 aa)    
Predicted Functional Partners:
fruA-2
Putative fructose-specific phosphotransferase system (PTS), IIABC component.
  
  
 0.906
SUB1763
Sugar phosphotransferase system (PTS), IIABC component.
 
 
 0.828
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
 
 
 0.827
SUB0195
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
 
  
 0.809
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
  
 
 0.798
SUB0830
Transcription antiterminator (pseudogene); HMMPfam hit to PF00874, PRD domain, score 2.1e-14.
  
 
 0.798
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.785
SUB0196
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIA component.
 
  
 0.757
SUB1540
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.647
SUB0288
Sugar phosphotransferase system (PTS), IIA component.
 
    0.635
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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