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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB01996-phosphogluconate dehydrogenase family protein; Similar to the N-terminal regions of Saccharomyces cerevisiae (Baker's yeast) GND2 6-phosphogluconate dehydrogenase, decarboxylating 2 UniProt:6PG2_YEAST (492 aa) fasta scores: E()=3e-24, 37.209% id in 301 aa, and Escherichia coli 6-phosphogluconate dehydrogenase, decarboxylating Gnd UniProt:6PG9_ECOLI (468 aa) fasta scores: E()=3.1e-22, 36.333% id in 300 aa. (300 aa)    
Predicted Functional Partners:
SUB0201
Putative gluconokinase.
 
 
 0.986
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
 
  
 0.930
SUB1117
Conserved hypothetical protein.
    
 0.911
RPE
Putative ribulose-phosphate 3-epimerase; Similar to the C-terminal region of Spinacia oleracea (Spinach) ribulose-phosphate 3-epimerase, chloroplast precursor RPE (ec 5.1.3.1) (pentose-5-phosphate 3-epimerase) UniProt:RPE_SPIOL (EMBL:AF070941) (285 aa) fasta scores: E()=2.9e-21, 38.614% id in 202 aa.
    
 0.904
rpe
Putative ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.904
uxuA
Putative mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
    
 0.817
SUB0200
Similar to SUB0841, 50.535% identity (50.972% ungapped) in 467 aa overlap (7-471:6-470); and SUB0905, 49.465% identity (49.677% ungapped) in 467 aa overlap (7-471:8-474); and SUB0309, 47.689% identity (49.241% ungapped) in 476 aa overlap (7-469:4-477); and SUB0837, 47.390% identity (49.348% ungapped) in 479 aa overlap (7-469:5-480); and SUB0834, 43.788% identity (46.943% ungapped) in 491 aa overlap (7-471:6-489); and SUB1579, 45.473% identity (48.253% ungapped) in 486 aa overlap (3-471:5-479); Belongs to the glycosyl hydrolase 1 family.
       0.759
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
     
 0.503
SUB0198
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.501
SUB1398
Putative permease.
  
  
 0.489
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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