STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0201Putative gluconokinase. (478 aa)    
Predicted Functional Partners:
SUB0199
6-phosphogluconate dehydrogenase family protein; Similar to the N-terminal regions of Saccharomyces cerevisiae (Baker's yeast) GND2 6-phosphogluconate dehydrogenase, decarboxylating 2 UniProt:6PG2_YEAST (492 aa) fasta scores: E()=3e-24, 37.209% id in 301 aa, and Escherichia coli 6-phosphogluconate dehydrogenase, decarboxylating Gnd UniProt:6PG9_ECOLI (468 aa) fasta scores: E()=3.1e-22, 36.333% id in 300 aa.
 
 
 0.988
SUB1117
Conserved hypothetical protein.
    
 0.909
SUB0200
Similar to SUB0841, 50.535% identity (50.972% ungapped) in 467 aa overlap (7-471:6-470); and SUB0905, 49.465% identity (49.677% ungapped) in 467 aa overlap (7-471:8-474); and SUB0309, 47.689% identity (49.241% ungapped) in 476 aa overlap (7-469:4-477); and SUB0837, 47.390% identity (49.348% ungapped) in 479 aa overlap (7-469:5-480); and SUB0834, 43.788% identity (46.943% ungapped) in 491 aa overlap (7-471:6-489); and SUB1579, 45.473% identity (48.253% ungapped) in 486 aa overlap (3-471:5-479); Belongs to the glycosyl hydrolase 1 family.
  
  
 0.779
fruA-2
Putative fructose-specific phosphotransferase system (PTS), IIABC component.
     
 0.704
SUB1722
L-ribulose 5-phosphate 4-epimerase.
 
  
 0.670
idnO
Putative gluconate 5-dehydrogenase.
    
 0.531
SUB0198
Putative beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.514
SUB1398
Putative permease.
  
  
 0.487
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.477
SUB0196
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIA component.
       0.447
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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