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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tal2Probable transaldolase 2; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (214 aa)    
Predicted Functional Partners:
tkt2
Putative transketolase 2; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.984
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.943
fba
Fructose-bisphosphate aldolase.
  
 
 0.935
fsaA
Putative fructose-6-phosphate aldolase 1.
  
  
 
0.915
pfk
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.915
SUB1757
Putative transketolase subunit; Similar to the C-terminal region of Homo sapiens (Human) transketolase TKT UniProt:TKT_HUMAN (EMBL:HSTRANSKE) (623 aa) fasta scores: E()=2.7e-17, 27.213% id in 305 aa.
  
 
 0.915
SUB1758
Putative transketolase subunit; Similar to the N-terminal region of Homo sapiens (Human) transketolase TKT UniProt:TKT_HUMAN (EMBL:HSTRANSKE) (623 aa) fasta scores: E()=9.4e-24, 34.286% id in 280 aa.
    
 0.914
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.911
fbp
Putative fructose-1,6-bisphosphatase.
     
 0.902
tal1
Probable transaldolase 1; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 
0.900
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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