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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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SUB0350Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (400 aa)    
Predicted Functional Partners:
SUB0351
Putative D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.975
pbpX
Putative penicillin binding protein 2x.
  
 
 0.936
pbp1A
Putative penicillin-binding protein 1A.
  
 
 0.931
pbp1B
Putative penicillin-binding protein 1B.
  
 
 0.925
pbp2A
Penicillin-binding protein 2a.
  
 
 0.925
SUB1508
Putative D-alanyl-D-alanine carboxypeptidase.
    
 0.907
SUB0349
Putative surface-anchored protein (pseudogene); HMMPfam hit to PF00746, Gram positive anchor, score 5.8e-05; Belongs to the peptidase S11 family.
 
    
0.734
rlmH
Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
  
 0.443
greA
Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
 
     0.420
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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