STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0544Dihydroxyacetone kinase family protein. (191 aa)    
Predicted Functional Partners:
SUB0543
Dihydroxyacetone kinase family protein.
 
 0.999
SUB0545
Sugar phosphotransferase system (PTS), IIA component.
 
 0.999
SUB0541
Dihydroxyacetone kinase family protein.
  
 0.973
glpO
Alpha-glycerophosphate oxidase.
    
 0.828
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.813
glpF2
Glycerol uptake facilitator protein 2; Similar to SUB1431, 56.466% identity (56.466% ungapped) in 232 aa overlap (1-232:1-232); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.802
SUB0542
Conserved hypothetical protein.
 
     0.623
SUB0547
Conserved hypothetical protein.
       0.562
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
   
  
 0.472
pyrD
Putative dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
   
  
 0.456
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.