Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
glnQ4Putative glutamine transporter, ATP-binding protein 4; Similar to SUB1278, 53.719% identity (54.167% ungapped) in 242 aa overlap (3-244:5-244); and SUB1153, 51.653% identity (52.083% ungapped) in 242 aa overlap (4-245:6-245). (259 aa)    
Predicted Functional Partners:
SUB0548
Putative amino acid ABC transporter, permease protein.
 
 0.998
SUB0549
Putative amino acid ABC transporter, permease protein.
 0.997
SUB0550
Putative glutamine-binding protein precursor.
 
 0.992
SUB1279
Putative amino acid ABC transporter permease protein.
 
 0.919
SUB0992
Putative amino acid ABC transporter permease protein.
 
 0.893
SUB1018
Transport system membrane protein.
 
 0.888
SUB1415
ABC transporter permease protein.
 
 
 0.879
SUB0337
Glutamine ABC transporter, glutamine-binding protein/permease protein.
 
 
 0.862
SUB0638
Putative extracellular amino acid-binding protein; Similar to SUB0688, 59.245% identity (59.470% ungapped) in 265 aa overlap (1-264:1-265).
 
 
 0.826
SUB0688
Extracellular solute-binding protein; Similar to SUB0638, 59.245% identity (59.470% ungapped) in 265 aa overlap (1-265:1-264).
 
 
 0.826
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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