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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0614Cation transporting ATPase. (894 aa)    
Predicted Functional Partners:
SUB0613
Putative membrane protein (fragment); Probable gene remnant resulting from a deletion. Similar to C-terminal region of Enterococcus faecalis (Streptococcus faecalis) cation efflux family protein. UniProt:Q838Z8_ENTFA (EMBL:AE016947) (311 aa) fasta scores: E()=2.6e-08, 45.455% id in 66 aa. N-terminal region of the CDS is SUB0611.
       0.601
scpA-2
C5A peptidase precursor.
   
 0.523
acoL
HMMPfam hit to PF00689, Cation transporting ATPase, C-terminu, score 2.4e-24.
  
 
 0.473
SUB0334
Putative membrane protein.
  
 0.469
SUB1747
Putative membrane protein.
   
 
 0.465
SUB0371
TrkA family transport protein.
  
  
 0.459
SUB0890
Putative Na(+)/H(+) antiporter.
  
 
 0.443
SUB0016
Putative amino acid permease.
   
 
 0.441
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.438
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
 
 0.418
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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