Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUB0705N-acetylmuramoyl-L-alanine amidase. (758 aa)    
Predicted Functional Partners:
stk1
Serine/threonine-protein kinase.
  
  
 0.733
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.639
SUB0660
Putative pullulanase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.612
SUB0707
Putative membrane protein.
       0.601
cinA
CinA-like protein; Belongs to the CinA family.
 
     0.596
SUB1693
Rhomboid family membrane protein.
   
   0.595
pbpX
Putative penicillin binding protein 2x.
  
  
 0.572
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
  
 0.554
SUB0704
GtrA-like protein.
       0.551
SUB0697
Putative polysaccharide export ABC transporter permease protein.
       0.545
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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