STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0705N-acetylmuramoyl-L-alanine amidase. (758 aa)    
Predicted Functional Partners:
SUB1693
Rhomboid family membrane protein.
  
   0.644
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
     
 0.638
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
  
 0.631
SUB0660
Putative pullulanase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.630
SUB0707
Putative membrane protein.
       0.593
glr
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
  
 0.586
SUB0704
GtrA-like protein.
       0.574
SUB0697
Putative polysaccharide export ABC transporter permease protein.
       0.553
stk1
Serine/threonine-protein kinase.
  
  
 0.548
SUB0698
Putative polysaccharide export system ATP-binding protein.
       0.546
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.