Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (407 aa)    
Predicted Functional Partners:
pepV
HMMPfam hit to PF02517, CAAX amino terminal protease family, score 1.2e-09.
     
 0.838
pepQ
Putative Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
  
 
 0.836
SUB0707
Putative membrane protein.
     
 0.812
SUB1550
Putative metallopeptidase; Belongs to the peptidase M24B family.
  
 
 0.797
pepN
Putative lysyl-aminopeptidase.
      
 0.761
pepO
Putative endopeptidase O.
   
  
 0.749
pepXP
Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
      
 0.710
pepS
Aminopeptidase PepS.
  
  
 0.671
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.667
pepB
Putative oligopeptidase.
  
  
 0.659
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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