Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB0707Putative membrane protein. (162 aa)    
Predicted Functional Partners:
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
     
 0.812
cmk
Cytidylate kinase.
     
 0.621
SUB0705
N-acetylmuramoyl-L-alanine amidase.
       0.601
SUB0701
Putative membrane protein.
       0.599
SUB0696
Putative glycosyltransferase.
       0.593
SUB0697
Putative polysaccharide export ABC transporter permease protein.
       0.593
SUB0700
Rhamnan synthesis protein F family protein.
       0.575
SUB0695
Putative rhamnosyltransferase.
       0.569
SUB0709
Putative membrane protein.
       0.443
SUB0698
Putative polysaccharide export system ATP-binding protein.
       0.410
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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