STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0709Putative membrane protein. (169 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase.
       0.768
SUB1635
Putative membrane anchored protein.
 
     0.748
SUB0012
Putative exported protein.
 
     0.704
SUB0150
Conserved hypothetical protein.
  
     0.701
SUB1737
Putative exported protein.
 
     0.646
SUB0708
Putative ferredoxin.
       0.614
SUB0010
Putative septum formation initiator protein.
 
     0.595
SUB0973
Conserved hypothetical protein.
  
     0.586
SUB0700
Rhamnan synthesis protein F family protein.
 
    0.580
mecA
Adapter protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
    0.561
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.