Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SUB0738Putative permease. (407 aa)    
Predicted Functional Partners:
SUB0737
ABC transporter ATP-binding protein.
 
 0.999
SUB0736
Putative exported protein.
 
 
 0.998
SUB0204
ABC transporter ATP-binding protein.
 
 0.974
SUB0683
ABC transporter ATP-binding protein.
 
 0.974
SUB0919
ABC transporter ATP-binding protein.
 
 0.960
SUB0975
ABC transporter ATP-binding protein.
 
 0.941
SUB0991
Putative amino acid ABC transporter ATP-binding protein.
 
      0.883
ftsE
Putative cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.853
SUB0739
Putative membrane protein.
       0.835
glnQ4
Putative glutamine transporter, ATP-binding protein 4; Similar to SUB1278, 53.719% identity (54.167% ungapped) in 242 aa overlap (3-244:5-244); and SUB1153, 51.653% identity (52.083% ungapped) in 242 aa overlap (4-245:6-245).
 
      0.817
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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