Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| SUB0098 | SUB0789 | AraC family regulatory protein (fragment); Gene remnant. Similar to an internal region of Fusobacterium nucleatum (subsp. nucleatum) transcriptional regulator, AraC family UniProt:Q8RGI0_FUSNN (EMBL:AE010544) (281 aa) fasta scores: E()=1.2e-19, 48.062% id in 129 aa. | Putative replication initiator protein. | 0.518 |
| SUB0785 | SUB0786 | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | Conserved hypothetical protein. | 0.661 |
| SUB0785 | SUB0787 | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | 0.681 |
| SUB0785 | SUB0789 | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | Putative replication initiator protein. | 0.441 |
| SUB0786 | SUB0785 | Conserved hypothetical protein. | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | 0.661 |
| SUB0786 | SUB0787 | Conserved hypothetical protein. | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | 0.808 |
| SUB0786 | SUB0788 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.412 |
| SUB0786 | SUB0789 | Conserved hypothetical protein. | Putative replication initiator protein. | 0.424 |
| SUB0787 | SUB0785 | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | 0.681 |
| SUB0787 | SUB0786 | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | Conserved hypothetical protein. | 0.808 |
| SUB0787 | SUB0788 | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | Conserved hypothetical protein. | 0.412 |
| SUB0787 | SUB0789 | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | Putative replication initiator protein. | 0.534 |
| SUB0788 | SUB0786 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.412 |
| SUB0788 | SUB0787 | Conserved hypothetical protein. | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | 0.412 |
| SUB0788 | SUB0789 | Conserved hypothetical protein. | Putative replication initiator protein. | 0.800 |
| SUB0789 | SUB0098 | Putative replication initiator protein. | AraC family regulatory protein (fragment); Gene remnant. Similar to an internal region of Fusobacterium nucleatum (subsp. nucleatum) transcriptional regulator, AraC family UniProt:Q8RGI0_FUSNN (EMBL:AE010544) (281 aa) fasta scores: E()=1.2e-19, 48.062% id in 129 aa. | 0.518 |
| SUB0789 | SUB0785 | Putative replication initiator protein. | Putative plasmid replication protein; Similar to SUB1608, 72.043% identity (72.043% ungapped) in 186 aa overlap (1-186:1-186). | 0.441 |
| SUB0789 | SUB0786 | Putative replication initiator protein. | Conserved hypothetical protein. | 0.424 |
| SUB0789 | SUB0787 | Putative replication initiator protein. | Integrase; CDS is extended at the C-terminus in comparison to orthologues. Possible frameshift mutation in the C-terminus. Similar to SUB0805, 56.021% identity (56.021% ungapped) in 382 aa overlap (4-385:8-389); Belongs to the 'phage' integrase family. | 0.534 |
| SUB0789 | SUB0788 | Putative replication initiator protein. | Conserved hypothetical protein. | 0.800 |