STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lacA2Galactose-6-phosphate isomerase LacA subunit 2; Similar to SUB1457, 74.286% identity (74.286% ungapped) in 140 aa overlap (1-140:1-140). (141 aa)    
Predicted Functional Partners:
lacB2
Galactose-6-phosphate isomerase LacB subunit 2; Similar to SUB1456, 77.778% identity (77.778% ungapped) in 171 aa overlap (1-171:1-171).
 
 0.999
lacB1
Galactose-6-phosphate isomerase LacB subunit 1; Similar to SUB0794, 77.778% identity (77.778% ungapped) in 171 aa overlap (1-171:1-171).
 
 0.997
lacC2
Tagatose-6-phosphate kinase 2; Similar to SUB1455, 61.736% identity (61.935% ungapped) in 311 aa overlap (1-310:1-311); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.995
lacG2
6-phospho-beta-galactosidase 2; Similar to SUB1448, 76.559% identity (76.559% ungapped) in 465 aa overlap (3-467:2-466); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.939
lacC1
Tagatose-6-phosphate kinase 1; Similar to SUB0795, 61.736% identity (61.935% ungapped) in 311 aa overlap (1-311:1-310); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.929
lacG1
6-phospho-beta-galactosidase 1; Similar to SUB0800, 76.559% identity (76.559% ungapped) in 465 aa overlap (2-466:3-467).
  
 
 0.922
pfk
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.917
lacA1
Galactose-6-phosphate isomerase LacA subunit 1; Similar to SUB0793, 74.286% identity (74.286% ungapped) in 140 aa overlap (1-140:1-140).
  
  
 
0.901
agaS
Putative tagatose-6-phosphate aldose/ketose isomerase.
     
  0.900
lacD2
Tagatose 1,6-diphosphate aldolase 2; Similar to SUB1454, 75.460% identity (75.692% ungapped) in 326 aa overlap (1-326:1-325); and SUB0040, 75.000% identity (75.232% ungapped) in 324 aa overlap (3-326:4-326); Belongs to the aldolase LacD family.
  
  
 0.743
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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