STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacT2Transcription antiterminator LacT 2; Similar to SUB1452, 49.097% identity (49.097% ungapped) in 277 aa overlap (1-277:1-277). (277 aa)    
Predicted Functional Partners:
SUB0830
Transcription antiterminator (pseudogene); HMMPfam hit to PF00874, PRD domain, score 2.1e-14.
 
 
 0.890
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
 
 
 0.860
SUB1763
Sugar phosphotransferase system (PTS), IIABC component.
 
 
 0.812
lacE2
Putative lactose-specific phosphotransferase system (PTS), IIBC component 2; Similar to SUB1450, 61.717% identity (62.050% ungapped) in 559 aa overlap (1-558:1-557).
 
  
 0.804
lacF2
Putative lactose-specific phosphotransferase system (PTS), IIA component 2; Similar to SUB1451, 60.396% identity (60.396% ungapped) in 101 aa overlap (1-101:1-101).
 
  
 0.737
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
 
 
 0.705
SUB0530
Transcriptional regulator (antiterminator).
 
  
 0.603
SUB0194
Transcriptional regulator (antiterminator).
 
  
 0.587
SUB1704
Transcription antiterminator.
 
  
 0.542
fruA-2
Putative fructose-specific phosphotransferase system (PTS), IIABC component.
 
  
 0.519
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.