STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0806Putative integrase (pseudogene); HMMPfam hit to PF00589, Phage integrase family, score 1.7e-10. (463 aa)    
Predicted Functional Partners:
glkA
Glucokinase.
  
 
 0.909
pgmA
Putative phosphomannomutase.
     
 0.900
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
  0.900
SUB1540
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.892
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.869
SUB0807
Putative transcriptional regulator.
 
  
 0.833
SUB0531
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
 
 
 0.826
SUB0195
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
 
 
 0.823
SUB0196
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIA component.
 
 
 0.810
SUB0533
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.787
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.