STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malPSodium-dependent malate transporter. (444 aa)    
Predicted Functional Partners:
SUB0825
NAD-dependent malic enzyme.
 
  
 0.884
SUB0823
Putative sensor kinase.
 
  
 0.882
SUB0822
Response regulator protein.
 
  
 0.786
citX
Puatative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
   
 0.559
citD
Putative citrate lyase beta subunit (pseudogene); Covalent carrier of the coenzyme of citrate lyase.
 
   
 0.524
citF
Putative citrate lyase alpha subunit.
 
   
 0.523
SUB0236
Putative glucose-specific phosphotransferase system (PTS), IIABC component.
  
   
 0.463
scrA
Putative sucrose-specific phosphotransferase system (PTS), IIABC component.
  
   
 0.459
SUB0826
Putative surface-anchored subtilase family protein.
       0.419
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.