Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
SUB0826Putative surface-anchored subtilase family protein. (1483 aa)    
Predicted Functional Partners:
scpA-2
C5A peptidase precursor.
 
 
0.707
SUB0479
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.557
SUB0783
Putative FtsK/SpoIIIE family protein.
   
 
 0.557
SUB0827
Voltage gated chloride channel family protein.
       0.492
SUB0825
NAD-dependent malic enzyme.
  
    0.456
pepO
Putative endopeptidase O.
  
    0.454
SUB1368
Putative esterase.
 
 
 0.449
stk1
Serine/threonine-protein kinase.
 
  
 0.433
smc
Putative chromosome partition protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.426
SUB1635
Putative membrane anchored protein.
   
 
 0.426
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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