Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUB0834Similar to SUB0837, 52.390% identity (54.906% ungapped) in 502 aa overlap (1-494:1-487); and SUB0841, 49.800% identity (52.866% ungapped) in 500 aa overlap (1-495:1-476); and SUB0309, 44.848% identity (46.541% ungapped) in 495 aa overlap (6-495:4-485); and SUB0905, 46.800% identity (49.893% ungapped) in 500 aa overlap (3-495:5-480); and SUB0200, 43.788% identity (46.943% ungapped) in 491 aa overlap (6-489:7-471); and SUB1579, 47.129% identity (51.073% ungapped) in 505 aa overlap (3-494:6-484); Belongs to the glycosyl hydrolase 1 family. (495 aa)    
Predicted Functional Partners:
glkA
Glucokinase.
  
 
 0.908
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.903
pgmA
Putative phosphomannomutase.
     
 0.900
SUB0533
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.873
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.790
SUB1540
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.776
SUB0195
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
  
 
 0.773
SUB0529
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family IIB component.
  
 
 0.773
SUB0531
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
  
 
 0.766
SUB0196
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIA component.
  
 
 0.734
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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