STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0840Putative transporter protein. (309 aa)    
Predicted Functional Partners:
SUB0839
Phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
 
    0.790
SUB0838
Phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
  
    0.671
SUB0841
Similar to SUB0905, 59.158% identity (59.408% ungapped) in 475 aa overlap (4-476:6-480); and SUB0837, 57.290% identity (59.110% ungapped) in 487 aa overlap (3-475:2-487); and SUB0200, 50.535% identity (50.972% ungapped) in 467 aa overlap (6-470:7-471); and SUB0834, 49.800% identity (52.866% ungapped) in 500 aa overlap (1-476:1-495); and SUB0309, 47.835% identity (49.573% ungapped) in 485 aa overlap (6-476:4-485); and SUB1579, 53.347% identity (55.195% ungapped) in 478 aa overlap (6-472:9-481); Belongs to the glycosyl hydrolase 1 family.
       0.668
SUB1351
Conserved hypothetical protein.
 
     0.665
SUB0837
Similar to SUB0841, 57.290% identity (59.110% ungapped) in 487 aa overlap (2-487:3-475); and SUB0309, 51.844% identity (52.929% ungapped) in 488 aa overlap (4-487:3-484); and SUB0834, 52.390% identity (54.906% ungapped) in 502 aa overlap (1-487:1-494); and SUB1579, 50.820% identity (53.333% ungapped) in 488 aa overlap (5-484:9-481); and SUB0905, 50.103% identity (51.695% ungapped) in 487 aa overlap (3-487:6-479); and SUB0200, 47.390% identity (49.348% ungapped) in 479 aa overlap (5-480:7-469); Belongs to the glycosyl hydrolase 1 family.
       0.578
SUB0825
NAD-dependent malic enzyme.
  
  
 0.561
SUB0842
Putative membrane protein.
       0.491
SUB1359
Putative transporter protein.
  
     0.419
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.403
SUB1582
RpiR family regulatory protein.
  
     0.401
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.