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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0841Similar to SUB0905, 59.158% identity (59.408% ungapped) in 475 aa overlap (4-476:6-480); and SUB0837, 57.290% identity (59.110% ungapped) in 487 aa overlap (3-475:2-487); and SUB0200, 50.535% identity (50.972% ungapped) in 467 aa overlap (6-470:7-471); and SUB0834, 49.800% identity (52.866% ungapped) in 500 aa overlap (1-476:1-495); and SUB0309, 47.835% identity (49.573% ungapped) in 485 aa overlap (6-476:4-485); and SUB1579, 53.347% identity (55.195% ungapped) in 478 aa overlap (6-472:9-481); Belongs to the glycosyl hydrolase 1 family. (476 aa)    
Predicted Functional Partners:
glkA
Glucokinase.
  
 
 0.908
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.903
pgmA
Putative phosphomannomutase.
     
  0.900
SUB0533
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.825
SUB0529
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family IIB component.
  
 
 0.756
SUB0195
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
  
 
 0.755
SUB0197
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.748
SUB1540
Sugar phosphotransferase system (PTS), IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.745
SUB0531
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIB component.
  
 
 0.718
SUB0196
Sugar phosphotransferase system (PTS), lactose/cellobiose-specific family, IIA component.
  
 
 0.716
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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